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Intron Name: Anas_platyrhynchos_platyrhynchos_5_559641_561870_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

559641 - 561870

Intron Length:

2230

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

ATTATCACTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

CTGTTTTTACTT

Flanking Amino Acid:

YDGQVLQKLFEKLESEKLNV

Intron Amino Acid Position:

134

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

78.7

29.9

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

0.58

0.9

71.8

38.5

Minor 5ss

32.9

-1.9

2.9

37.3

41.2

Minor BPS

56.4

0.28

1.6

70.08

42.4

Associated Gene:

Gene:

PARVA

Ensembl Gene ID:

ENSAPLG00000016301

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017020

542895 - 604188

61294