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Intron Name: Anas_platyrhynchos_platyrhynchos_5_5598541_5627928_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5598541 - 5627928

Intron Length:

29388

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGAT

5'SS Class:

strong_major

3'SS Sequence:

TTATTTTCCTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

CTCTCTTTATTT

Flanking Amino Acid:

KEEDHAGTFQIIDEEETQFM

Intron Amino Acid Position:

111

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

0.8

80.3

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

81.5

0.71

0.7

81.7

Minor 5ss

26.7

-2.7

3.3

37.5

47.2

Minor BPS

62.4

0.47

1.6

74.81

43.2

Associated Gene:

Gene:

SPON1

Ensembl Gene ID:

ENSAPLG00000006849

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010246

5444213 - 5633863

189651

ENSAPLT00000007124

5451750 - 5633863

182114