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Intron Name: Anas_platyrhynchos_platyrhynchos_5_561974_562609_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

561974 - 562609

Intron Length:

636

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGAAA

5'SS Class:

strong_major

3'SS Sequence:

GTTTCCTGTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TAGTGTATAATT

Flanking Amino Acid:

NDPKLQELMKVLIDWINDVL

Intron Amino Acid Position:

100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

76.8

33.4

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

74.1

0.54

0.9

69.1

37.1

Minor 5ss

31.6

-2.1

3.1

39.6

45.9

Minor BPS

49.2

0.02

69.56

41.9

Associated Gene:

Gene:

PARVA

Ensembl Gene ID:

ENSAPLG00000016301

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017020

542895 - 604188

61294