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Intron Name: Anas_platyrhynchos_platyrhynchos_5_562681_562779_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

562681 - 562779

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAATTCAC

5'SS Class:

strong_major

3'SS Sequence:

TTAAACCTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTCCTTTTAAAC

Flanking Amino Acid:

FELDPEDTMLEENEVRTMVD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

74.2

36.3

Major BPS

90.4

0.7

90.2

19.3

Major PPT

73.3

0.52

62.9

43.5

Minor 5ss

34.6

-1.8

2.9

44.3

43.4

Minor BPS

0.35

1.4

68.31

37.2

Associated Gene:

Gene:

PARVA

Ensembl Gene ID:

ENSAPLG00000016301

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017020

542895 - 604188

61294