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Intron Name: Anas_platyrhynchos_platyrhynchos_5_5628036_5633640_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5628036 - 5633640

Intron Length:

5605

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

TCTTATATTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TGTTTCTTATAT

Flanking Amino Acid:

EFYKPGNSYRVTLSAATPAY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

69.7

43.7

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

84.3

0.77

0.8

81.7

34.3

Minor 5ss

39.2

-1.2

2.8

45.3

Minor BPS

64.5

0.53

1.7

81.78

39.4

Associated Gene:

Gene:

SPON1

Ensembl Gene ID:

ENSAPLG00000006849

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010246

5444213 - 5633863

189651

ENSAPLT00000007124

5451750 - 5633863

182114