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Intron Name: Anas_platyrhynchos_platyrhynchos_5_56281781_56282269_R

Intron Information:

Intron Rank:

144809

Intron Class:

major

Intron Phase:

Intron Coordinates:

56281781 - 56282269

Intron Length:

489

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTCAAAT

5'SS Class:

major

3'SS Sequence:

TCCTTTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

AGATCTTTATGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.9

0.42

1.1

69.4

36.6

Major BPS

83.9

0.84

73.9

41.3

Major PPT

90.3

0.91

0.6

83.6

31.5

Minor 5ss

41.3

-1

2.9

57.1

47.2

Minor BPS

50.8

0.1

1.9

67.81

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025285

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033162

56281611 - 56288060

6450