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Intron Name: Anas_platyrhynchos_platyrhynchos_5_56286219_56287907_R

Intron Information:

Intron Rank:

144812

Intron Class:

major

Intron Phase:

Intron Coordinates:

56286219 - 56287907

Intron Length:

1689

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGCAGA

5'SS Class:

major

3'SS Sequence:

TTTGTCTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAC

U12 Branch Point Sequence:

TTCTCCAGGACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

71.7

40.1

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

84.7

0.78

0.8

77.7

36.7

Minor 5ss

40.5

-1.1

2.9

41.4

Minor BPS

56.3

0.18

1.8

71.86

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025285

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033162

56281611 - 56288060

6450