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Intron Name: Anas_platyrhynchos_platyrhynchos_5_56407524_56412696_R

Intron Information:

Intron Rank:

133442

Intron Class:

major

Intron Phase:

Intron Coordinates:

56407524 - 56412696

Intron Length:

5173

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAAAACT

5'SS Class:

major

3'SS Sequence:

CTTTTTCCCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

GGTTTAATAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.1

73.5

Major BPS

81.8

0.79

1.1

34.5

Major PPT

0.72

0.6

81.6

23.5

Minor 5ss

37.9

-1.4

3.2

55.1

Minor BPS

51.2

0.02

1.9

66.25

38.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019058

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036190

56405964 - 56412793

6830