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Intron Name: Anas_platyrhynchos_platyrhynchos_5_56436461_56438605_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56436461 - 56438605

Intron Length:

2145

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

TTATGTGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTGTCTTATGT

Flanking Amino Acid:

MSALQLMGGNDYGCDMDDDD

Intron Amino Acid Position:

191

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

66.1

42.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

79.9

0.67

77.1

41.8

Minor 5ss

34.6

-1.7

2.8

45.3

Minor BPS

55.9

0.26

78.81

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010609

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011088

56435426 - 56504614

69189