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Intron Name: Anas_platyrhynchos_platyrhynchos_5_56438775_56441521_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56438775 - 56441521

Intron Length:

2747

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAATAAA

U12 Branch Point Sequence:

AGGGCTGCAATG

Flanking Amino Acid:

QLAKKAATEEVTLPTAQAEA

Intron Amino Acid Position:

135

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.8

26.2

Major BPS

53.1

0.08

1.2

56.3

37.2

Major PPT

91.1

0.92

0.6

87.3

23.2

Minor 5ss

41.1

-1

2.5

50.4

46.1

Minor BPS

38.7

-0.9

2.1

37.92

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010609

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011088

56435426 - 56504614

69189