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Intron Name: Anas_platyrhynchos_platyrhynchos_5_56515526_56517110_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56515526 - 56517110

Intron Length:

1585

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGAA

5'SS Class:

strong_major

3'SS Sequence:

GCTTATTCCTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TTCTTTTTGACA

Flanking Amino Acid:

GRRPSGLCGAALLVAARMHD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

77.6

32.8

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

71.9

0.49

0.8

69.8

36.3

Minor 5ss

30.6

-2.2

3.4

39.4

46.5

Minor BPS

72.3

0.7

1.1

77.18

33.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025913

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038018

56500816 - 56517192

16377

ENSAPLT00000036775

56501589 - 56517192

15604