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Intron Name: Anas_platyrhynchos_platyrhynchos_5_56520812_56520930_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

56520812 - 56520930

Intron Length:

119

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGGAC

5'SS Class:

strong_major

3'SS Sequence:

CCCTCGCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCACAC

U12 Branch Point Sequence:

CTCTCCACACCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

76.5

32.8

Major BPS

55.2

0.13

1.1

62.9

34.3

Major PPT

75.2

0.57

0.8

68.1

Minor 5ss

29.5

-2.3

3.5

40.1

46.3

Minor BPS

47.2

-0.1

2.1

68.85

47.6

Associated Gene:

Gene:

BTBD6

Ensembl Gene ID:

ENSAPLG00000010734

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011173

56520680 - 56522762

2083