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Intron Name: Anas_platyrhynchos_platyrhynchos_5_56521022_56521325_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

56521022 - 56521325

Intron Length:

304

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGTGCA

5'SS Class:

major

3'SS Sequence:

CTCTATTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTCTAT

U12 Branch Point Sequence:

CCCTCTCTATTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

1.2

68.9

35.7

Major BPS

61.2

0.28

1.4

60.7

45.4

Major PPT

84.3

0.77

0.8

76.2

37.5

Minor 5ss

35.4

-1.7

2.9

42.3

44.4

Minor BPS

46.1

-0.2

1.9

59.33

45.1

Associated Gene:

Gene:

BTBD6

Ensembl Gene ID:

ENSAPLG00000010734

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011173

56520680 - 56522762

2083