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Intron Name: Anas_platyrhynchos_platyrhynchos_5_56521445_56521687_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56521445 - 56521687

Intron Length:

243

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TTCCCCCCTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAGAA

U12 Branch Point Sequence:

TTTCCCTTAAGA

Flanking Amino Acid:

VEPAAFLILLKYMYSDEIDL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

73.6

37.1

Major BPS

58.2

0.21

1.1

55.4

40.4

Major PPT

74.8

0.56

0.7

66.5

29.9

Minor 5ss

34.7

-1.7

3.2

43.8

Minor BPS

76.5

0.83

1.6

85.03

34.5

Associated Gene:

Gene:

BTBD6

Ensembl Gene ID:

ENSAPLG00000010734

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011173

56520680 - 56522762

2083