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Intron Name: Anas_platyrhynchos_platyrhynchos_5_56557842_56587034_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

56557842 - 56587034

Intron Length:

29193

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATCCACA

5'SS Class:

weak_major

3'SS Sequence:

TTAATTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TCCTTGTTAATT

Flanking Amino Acid:

KESRAQTLQNGKRQIHHLGN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.8

0.26

1.2

56.9

41.9

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

80.7

0.69

0.9

73.8

41.4

Minor 5ss

55.1

0.17

2.1

64.2

42.1

Minor BPS

57.8

0.32

2.1

74.4

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016761

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042562

56557615 - 56600627

43013