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Intron Name: Anas_platyrhynchos_platyrhynchos_5_56618491_56619794_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56618491 - 56619794

Intron Length:

1304

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGGGGC

5'SS Class:

major

3'SS Sequence:

TGTTTTCTAACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAC

U12 Branch Point Sequence:

TGTTTTCTAACA

Flanking Amino Acid:

LPDFSELFATKVGIIGAHCS

Intron Amino Acid Position:

370

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.55

61.8

37.2

Major BPS

81.9

0.79

0.8

81.9

Major PPT

81.5

0.71

0.9

77.7

35.5

Minor 5ss

25.8

-2.8

3.4

31.9

36.7

Minor BPS

64.8

0.46

1.6

76.34

34.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010843

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019127

56616870 - 56634419

17550

ENSAPLT00000018774

56616870 - 56632991

16122

ENSAPLT00000041994

56616870 - 56635647

18778

ENSAPLT00000011285

56616870 - 56634419

17550

ENSAPLT00000030292

56601926 - 56634419

32494

ENSAPLT00000027220

56616870 - 56635647

18778