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Intron Name: Anas_platyrhynchos_platyrhynchos_5_56622635_56627130_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56622635 - 56627130

Intron Length:

4496

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGCCAA

5'SS Class:

major

3'SS Sequence:

TTCACTGCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

CTGCTATTAATT

Flanking Amino Acid:

LAQQSHSPSGKRTTSLQKDW

Intron Amino Acid Position:

228

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

67.9

39.2

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

72.2

0.5

0.9

69.8

36.5

Minor 5ss

38.9

-1.2

3.1

47.7

42.3

Minor BPS

55.6

0.25

1.6

69.84

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010843

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027220

56616870 - 56635647

18778

ENSAPLT00000019127

56616870 - 56634419

17550

ENSAPLT00000018774

56616870 - 56632991

16122

ENSAPLT00000041994

56616870 - 56635647

18778

ENSAPLT00000011285

56616870 - 56634419

17550

ENSAPLT00000030292

56601926 - 56634419

32494