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Intron Name: Anas_platyrhynchos_platyrhynchos_5_56627272_56630901_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56627272 - 56630901

Intron Length:

3630

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTC|GTGAGTACA

5'SS Class:

major

3'SS Sequence:

TTTTTTTAAACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

TTTTTTTTAAAC

Flanking Amino Acid:

ALEKETTSLISTMILLENKE

Intron Amino Acid Position:

181

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.2

0.43

1.3

69.4

36.6

Major BPS

87.3

0.93

0.8

36.5

Major PPT

83.5

0.75

0.9

81.8

33.7

Minor 5ss

32.1

-2

2.6

35.4

34.5

Minor BPS

76.4

0.81

1.2

82.98

29.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010843

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019127

56616870 - 56634419

17550

ENSAPLT00000018774

56616870 - 56632991

16122

ENSAPLT00000011285

56616870 - 56634419

17550

ENSAPLT00000030292

56601926 - 56634419

32494

ENSAPLT00000027220

56616870 - 56635647

18778