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Intron Name: Anas_platyrhynchos_platyrhynchos_5_56632216_56632910_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

56632216 - 56632910

Intron Length:

695

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTCAA

5'SS Class:

strong_major

3'SS Sequence:

GGTCAACTCCTAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AATTAAC

U12 Branch Point Sequence:

GTGTCCTTAAAT

Flanking Amino Acid:

FREICVKTLKSIFQDEGSAT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

75.9

35.2

Major BPS

73.1

0.57

0.9

73.7

27.1

Major PPT

58.5

0.19

0.9

47.8

40.3

Minor 5ss

39.6

-1.2

2.8

49.3

46.9

Minor BPS

77.9

0.95

1.3

86.41

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010843

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030292

56601926 - 56634419

32494

ENSAPLT00000027220

56616870 - 56635647

18778

ENSAPLT00000019127

56616870 - 56634419

17550

ENSAPLT00000011285

56616870 - 56634419

17550

ENSAPLT00000041994

56616870 - 56635647

18778