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Intron Name: Anas_platyrhynchos_platyrhynchos_5_56682208_56684547_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

56682208 - 56684547

Intron Length:

2340

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

CTCTTCCCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGATGAA

U12 Branch Point Sequence:

TCTTGCGGAGAT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

0.9

79.3

31.1

Major BPS

51.5

0.04

1.2

43.5

39.2

Major PPT

82.8

0.74

0.7

77.1

24.9

Minor 5ss

29.2

-2.4

2.5

36.8

Minor BPS

38.8

-0.7

2.5

61.82

47.6

Associated Gene:

Gene:

ZBTB25

Ensembl Gene ID:

ENSAPLG00000016857

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034488

56682163 - 56687387

5225