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Intron Name: Anas_platyrhynchos_platyrhynchos_5_56684728_56686249_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56684728 - 56686249

Intron Length:

1522

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGACG

5'SS Class:

strong_major

3'SS Sequence:

TGTCTTGTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTAAT

U12 Branch Point Sequence:

ATGTACTTAATC

Flanking Amino Acid:

YFKMIFIHQTSECIKIQPAD

Intron Amino Acid Position:

229

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

76.1

39.5

Major BPS

78.2

0.7

77.9

32.1

Major PPT

0.74

0.9

80.5

Minor 5ss

32.6

-2

3.1

40.4

45.5

Minor BPS

69.6

0.6

1.5

73.82

Associated Gene:

Gene:

ZBTB25

Ensembl Gene ID:

ENSAPLG00000016857

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034488

56682163 - 56687387

5225

ENSAPLT00000033255

56683477 - 56692637

9161