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Intron Name: Anas_platyrhynchos_platyrhynchos_5_56703152_56703332_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

56703152 - 56703332

Intron Length:

181

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATAAT

U12 Branch Point Sequence:

TAGTAATTAAAT

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

77.2

32.8

Major BPS

0.72

78.4

31.2

Major PPT

0.97

0.5

16.2

Minor 5ss

32.6

-2

3.4

44.1

43.8

Minor BPS

53.6

0.19

1.9

73.3

42.5

Associated Gene:

Gene:

MTHFD1

Ensembl Gene ID:

ENSAPLG00000010974

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034039

56702227 - 56742156

39930