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Intron Name: Anas_platyrhynchos_platyrhynchos_5_56703439_56706716_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56703439 - 56706716

Intron Length:

3278

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTGAT

5'SS Class:

major

3'SS Sequence:

TTTTGTTGTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTAATGATTT

Flanking Amino Acid:

AGFLYPLVGTMSTMPGLPTR

Intron Amino Acid Position:

907

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

75.5

34.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

83.7

0.76

0.9

76.9

42.1

Minor 5ss

36.5

-1.5

3.4

54.7

43.6

Minor BPS

47.7

-0

2.1

75.41

Associated Gene:

Gene:

MTHFD1

Ensembl Gene ID:

ENSAPLG00000010974

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034039

56702227 - 56742156

39930