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Intron Name: Anas_platyrhynchos_platyrhynchos_5_56706870_56708005_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56706870 - 56708005

Intron Length:

1136

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGATTT

5'SS Class:

strong_major

3'SS Sequence:

TTGCCTTGCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TCCCTTTTCATT

Flanking Amino Acid:

QEKVTLYTKQGFGNLPICMA

Intron Amino Acid Position:

856

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

1.1

82.7

30.4

Major BPS

100

1.24

0.5

100

Major PPT

71.8

0.49

64.9

41.2

Minor 5ss

40.2

-1.1

3.1

47.2

Minor BPS

48.6

-0

1.7

63.63

Associated Gene:

Gene:

MTHFD1

Ensembl Gene ID:

ENSAPLG00000010974

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034039

56702227 - 56742156

39930

ENSAPLT00000011526

56705240 - 56742156

36917