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Intron Name: Anas_platyrhynchos_platyrhynchos_5_56708114_56709232_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56708114 - 56709232

Intron Length:

1119

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

GTCTTTTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

CCATGCTGACTT

Flanking Amino Acid:

SNFRFLYNVELPVIDKIRLI

Intron Amino Acid Position:

820

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

81.6

Major BPS

66.3

0.4

1.1

41.8

Major PPT

87.6

0.85

0.8

80.2

37.3

Minor 5ss

33.1

-1.9

3.4

48.3

47.4

Minor BPS

43.6

-0.4

2.1

56.84

46.1

Associated Gene:

Gene:

MTHFD1

Ensembl Gene ID:

ENSAPLG00000010974

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034039

56702227 - 56742156

39930

ENSAPLT00000011526

56705240 - 56742156

36917