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Intron Name: Anas_platyrhynchos_platyrhynchos_5_56709411_56710335_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56709411 - 56710335

Intron Length:

925

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCCTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACAAAT

U12 Branch Point Sequence:

TTCTCCTTACAG

Flanking Amino Acid:

VPVVVAVNAFKTDTKAELAL

Intron Amino Acid Position:

760

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

75.1

35.1

Major BPS

69.5

0.48

73.5

28.6

Major PPT

89.8

0.9

0.6

84.3

23.7

Minor 5ss

33.7

-1.9

3.2

40.4

Minor BPS

62.1

0.24

1.8

68.4

44.9

Associated Gene:

Gene:

MTHFD1

Ensembl Gene ID:

ENSAPLG00000010974

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034039

56702227 - 56742156

39930

ENSAPLT00000011526

56705240 - 56742156

36917