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Intron Name: Anas_platyrhynchos_platyrhynchos_5_56710437_56711482_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

56710437 - 56711482

Intron Length:

1046

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACCTTC

5'SS Class:

weak_major

3'SS Sequence:

GTATTCTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATAAAAT

U12 Branch Point Sequence:

TATTCTTTACAG

Flanking Amino Acid:

VPLPKEYTEENLQLLAKGCS

Intron Amino Acid Position:

727

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

1.2

73.2

39.3

Major BPS

61.8

0.29

1.1

67.7

34.6

Major PPT

82.8

0.74

0.9

76.5

37.4

Minor 5ss

63.9

0.47

2.4

76.5

39.2

Minor BPS

58.6

0.13

1.8

65.66

42.1

Associated Gene:

Gene:

MTHFD1

Ensembl Gene ID:

ENSAPLG00000010974

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034039

56702227 - 56742156

39930

ENSAPLT00000011526

56705240 - 56742156

36917