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Intron Name: Anas_platyrhynchos_platyrhynchos_5_56712074_56712273_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56712074 - 56712273

Intron Length:

200

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TCTCCTGCTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAT

U12 Branch Point Sequence:

TTTTTTTTCCTT

Flanking Amino Acid:

LKLVGKEGFVVTEAGFGADI

Intron Amino Acid Position:

666

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

74.2

36.5

Major BPS

82.3

0.8

0.9

81.8

30.8

Major PPT

73.6

0.53

0.8

65.7

Minor 5ss

32.2

-2

3.1

37.6

42.2

Minor BPS

43.7

-0.4

3.5

78.3

39.3

Associated Gene:

Gene:

MTHFD1

Ensembl Gene ID:

ENSAPLG00000010974

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034039

56702227 - 56742156

39930

ENSAPLT00000011526

56705240 - 56742156

36917