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Intron Name: Anas_platyrhynchos_platyrhynchos_5_56712386_56712924_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56712386 - 56712924

Intron Length:

539

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCCAC

5'SS Class:

strong_major

3'SS Sequence:

CCCAATTTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTCAT

U12 Branch Point Sequence:

ATTCCCGTATCC

Flanking Amino Acid:

VKPNLMQTLEGTPVFVHAGP

Intron Amino Acid Position:

629

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

68.4

38.7

Major BPS

72.5

0.56

1.2

39.9

Major PPT

69.8

0.45

0.9

60.9

39.8

Minor 5ss

32.7

-2

45.6

Minor BPS

50.6

-0

2.2

70.35

40.8

Associated Gene:

Gene:

MTHFD1

Ensembl Gene ID:

ENSAPLG00000010974

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034039

56702227 - 56742156

39930

ENSAPLT00000011526

56705240 - 56742156

36917