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Intron Name: Anas_platyrhynchos_platyrhynchos_5_56712994_56716033_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56712994 - 56716033

Intron Length:

3040

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTAAGAGAG

5'SS Class:

major

3'SS Sequence:

TTTTCCCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTGAT

U12 Branch Point Sequence:

TTTTTTTTCCCT

Flanking Amino Acid:

RGEPVTTDDLGVTGALAVLM

Intron Amino Acid Position:

606

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.47

1.1

60.7

38.1

Major BPS

74.7

0.61

0.9

63.4

35.6

Major PPT

87.2

0.84

0.6

85.9

21.1

Minor 5ss

32.3

-2

3.4

44.2

44.6

Minor BPS

45.4

-0.2

3.6

82.56

39.6

Associated Gene:

Gene:

MTHFD1

Ensembl Gene ID:

ENSAPLG00000010974

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034039

56702227 - 56742156

39930

ENSAPLT00000011526

56705240 - 56742156

36917