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Intron Name: Anas_platyrhynchos_platyrhynchos_5_56716175_56717142_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56716175 - 56717142

Intron Length:

968

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAATTATT

5'SS Class:

strong_major

3'SS Sequence:

TTATCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

CATTCTTTATTT

Flanking Amino Acid:

SPTEKGFSRTAQFDITVSSE

Intron Amino Acid Position:

559

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

84.1

33.9

Major BPS

88.7

0.96

0.8

36.5

Major PPT

86.3

0.82

0.8

81.3

30.4

Minor 5ss

42.2

-0.9

2.9

61.4

42.9

Minor BPS

64.2

0.52

1.6

76.5

40.9

Associated Gene:

Gene:

MTHFD1

Ensembl Gene ID:

ENSAPLG00000010974

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034039

56702227 - 56742156

39930

ENSAPLT00000011526

56705240 - 56742156

36917