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Intron Name: Anas_platyrhynchos_platyrhynchos_5_56718514_56720612_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56718514 - 56720612

Intron Length:

2099

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTTCCATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTTAT

U12 Branch Point Sequence:

TTCCTCTTATTT

Flanking Amino Acid:

FSEIQIRRLQKLGINKTDPT

Intron Amino Acid Position:

499

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.3

1.09

0.7

86.7

23.1

Major BPS

79.1

0.72

69.3

38.4

Major PPT

80.5

0.69

0.7

76.6

25.5

Minor 5ss

40.5

-1.1

2.7

50.7

45.7

Minor BPS

61.3

0.43

1.6

76.56

40.7

Associated Gene:

Gene:

MTHFD1

Ensembl Gene ID:

ENSAPLG00000010974

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034039

56702227 - 56742156

39930

ENSAPLT00000011526

56705240 - 56742156

36917