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Intron Name: Anas_platyrhynchos_platyrhynchos_5_56720688_56720775_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56720688 - 56720775

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGATCC

5'SS Class:

strong_major

3'SS Sequence:

TTCGTTCTTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAC

U12 Branch Point Sequence:

TCGTTCTTCAAG

Flanking Amino Acid:

MFHELTQNDQALYNRLVPSV

Intron Amino Acid Position:

474

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

69.5

36.3

Major BPS

76.8

0.67

0.9

75.9

Major PPT

73.4

0.53

71.5

38.6

Minor 5ss

37.8

-1.4

3.3

51.1

45.6

Minor BPS

48.9

-0.2

55.5

Associated Gene:

Gene:

MTHFD1

Ensembl Gene ID:

ENSAPLG00000010974

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034039

56702227 - 56742156

39930

ENSAPLT00000011526

56705240 - 56742156

36917