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Intron Name: Anas_platyrhynchos_platyrhynchos_5_56720884_56722931_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56720884 - 56722931

Intron Length:

2048

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTATGTCCTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

TATGTTTTATGT

Flanking Amino Acid:

GYSQVIPMEEFNLHLTGDIH

Intron Amino Acid Position:

438

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.9

89.8

23.7

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

75.2

0.57

0.9

67.1

40.2

Minor 5ss

46.2

-0.4

2.8

67.4

43.6

Minor BPS

48.1

-0

1.9

67.74

43.7

Associated Gene:

Gene:

MTHFD1

Ensembl Gene ID:

ENSAPLG00000010974

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034039

56702227 - 56742156

39930

ENSAPLT00000011526

56705240 - 56742156

36917