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Intron Name: Anas_platyrhynchos_platyrhynchos_5_56722979_56723265_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56722979 - 56723265

Intron Length:

287

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTATGTGCA

5'SS Class:

major

3'SS Sequence:

TGTTTCTCTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

ATTTACATGATT

Flanking Amino Acid:

PSQGPTFGIKGGAAGGGYSQ

Intron Amino Acid Position:

422

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

67.7

37.7

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

82.5

0.73

0.7

78.1

30.8

Minor 5ss

38.6

-1.3

41.3

45.2

Minor BPS

57.3

0.31

1.8

79.6

35.9

Associated Gene:

Gene:

MTHFD1

Ensembl Gene ID:

ENSAPLG00000010974

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034039

56702227 - 56742156

39930

ENSAPLT00000011526

56705240 - 56742156

36917