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Intron Name: Anas_platyrhynchos_platyrhynchos_5_56723403_56723917_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56723403 - 56723917

Intron Length:

515

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAGGTACT

5'SS Class:

major

3'SS Sequence:

TTTGTCACTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

TGCTTTGTCACT

Flanking Amino Acid:

QPDGKYVVVTGITPTPLGEG

Intron Amino Acid Position:

376

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

1.1

75.3

40.8

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

0.7

0.9

74.9

34.7

Minor 5ss

36.5

-1.5

43.6

Minor BPS

45.6

-0.2

2.3

67.13

44.4

Associated Gene:

Gene:

MTHFD1

Ensembl Gene ID:

ENSAPLG00000010974

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034039

56702227 - 56742156

39930

ENSAPLT00000011526

56705240 - 56742156

36917