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Intron Name: Anas_platyrhynchos_platyrhynchos_5_56724862_56725498_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56724862 - 56725498

Intron Length:

637

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGGA

5'SS Class:

strong_major

3'SS Sequence:

ATCCTCAATTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TCATCCTCAATT

Flanking Amino Acid:

GPMTVAMLMQSTVESAQRFL

Intron Amino Acid Position:

286

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.9

74.1

36.6

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

66.5

0.37

0.9

36.4

Minor 5ss

38.1

-1.3

3.1

49.4

46.8

Minor BPS

70.4

0.72

1.5

81.17

40.7

Associated Gene:

Gene:

MTHFD1

Ensembl Gene ID:

ENSAPLG00000010974

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034039

56702227 - 56742156

39930

ENSAPLT00000011526

56705240 - 56742156

36917