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Intron Name: Anas_platyrhynchos_platyrhynchos_5_56725627_56729467_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56725627 - 56729467

Intron Length:

3841

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCGTGGG

5'SS Class:

major

3'SS Sequence:

ATTGAATCTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCATTGAAT

Flanking Amino Acid:

VIDCGINHVPDSTKASGKRV

Intron Amino Acid Position:

243

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

63.3

43.1

Major BPS

100

1.24

0.5

100

Major PPT

70.8

0.47

59.8

45.4

Minor 5ss

25.6

-2.8

3.1

31.6

42.7

Minor BPS

69.9

0.71

1.7

90.05

33.3

Associated Gene:

Gene:

MTHFD1

Ensembl Gene ID:

ENSAPLG00000010974

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034039

56702227 - 56742156

39930

ENSAPLT00000011526

56705240 - 56742156

36917