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Intron Name: Anas_platyrhynchos_platyrhynchos_5_56729580_56730978_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56729580 - 56730978

Intron Length:

1399

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGGAT

U12 Branch Point Sequence:

TTTTTTTTTATA

Flanking Amino Acid:

HSKTSTLAEEVGKADILVVA

Intron Amino Acid Position:

206

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

28.8

Major BPS

71.4

0.53

1.4

71.4

45.1

Major PPT

94.7

1.01

0.5

91.9

19.2

Minor 5ss

31.6

-2.1

3.1

46.4

Minor BPS

66.5

0.51

1.5

77.98

32.4

Associated Gene:

Gene:

MTHFD1

Ensembl Gene ID:

ENSAPLG00000010974

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034039

56702227 - 56742156

39930

ENSAPLT00000011526

56705240 - 56742156

36917