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Intron Name: Anas_platyrhynchos_platyrhynchos_5_56731116_56731443_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56731116 - 56731443

Intron Length:

328

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGGG

5'SS Class:

strong_major

3'SS Sequence:

TCCTGTGGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTTCTTCTAATT

Flanking Amino Acid:

KGCMELISQTGIQVAGKRAV

Intron Amino Acid Position:

160

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

67.8

43.5

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

69.8

0.45

64.2

41.5

Minor 5ss

28.6

-2.5

3.5

37.8

47.1

Minor BPS

61.7

0.44

1.6

81.49

Associated Gene:

Gene:

MTHFD1

Ensembl Gene ID:

ENSAPLG00000010974

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034039

56702227 - 56742156

39930

ENSAPLT00000011526

56705240 - 56742156

36917