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Intron Name: Anas_platyrhynchos_platyrhynchos_5_56731799_56732159_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56731799 - 56732159

Intron Length:

361

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTACTTGTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAC

U12 Branch Point Sequence:

TGGTCTTTACTT

Flanking Amino Acid:

KLPNTATEAEVLKCIASLNG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.8

1.15

0.6

96.1

12.1

Major BPS

0.6

65.6

41.1

Major PPT

77.6

0.62

0.9

73.3

36.9

Minor 5ss

37.4

-1.4

2.8

50.6

45.9

Minor BPS

63.2

0.49

1.6

41.5

Associated Gene:

Gene:

MTHFD1

Ensembl Gene ID:

ENSAPLG00000010974

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034039

56702227 - 56742156

39930

ENSAPLT00000011526

56705240 - 56742156

36917