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Intron Name: Anas_platyrhynchos_platyrhynchos_5_56732214_56732887_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56732214 - 56732887

Intron Length:

674

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATGCCT

5'SS Class:

major

3'SS Sequence:

TTCTCATTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

GTATTCTCATTT

Flanking Amino Acid:

INMKLKAAAEIGISANHIKL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

68.9

41.6

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

86.1

0.81

0.7

80.9

29.8

Minor 5ss

33.5

-1.9

3.4

48.9

46.7

Minor BPS

50.6

0.1

1.8

69.55

41.5

Associated Gene:

Gene:

MTHFD1

Ensembl Gene ID:

ENSAPLG00000010974

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034039

56702227 - 56742156

39930

ENSAPLT00000011526

56705240 - 56742156

36917