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Intron Name: Anas_platyrhynchos_platyrhynchos_5_56838365_56840182_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

56838365 - 56840182

Intron Length:

1818

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTTTGTGGG

5'SS Class:

weak_major

3'SS Sequence:

TGTCTTTTCAGAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATTT

Flanking Amino Acid:

GNLVSQSLNTTESHPQPTKV

Intron Amino Acid Position:

319

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.8

0.11

1.2

47.3

41.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

62.1

0.27

1.7

71.7

38.2

Minor 5ss

36.4

-1.5

42.9

39.5

Minor BPS

70.5

0.72

1.5

86.8

33.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021888

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023131

56838141 - 56846117

7977