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Intron Name: Anas_platyrhynchos_platyrhynchos_5_56840397_56841027_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56840397 - 56841027

Intron Length:

631

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTGTTCTAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTTCAT

U12 Branch Point Sequence:

GTTCATTGCACT

Flanking Amino Acid:

TILECQKELMQLEKELLEQQ

Intron Amino Acid Position:

248

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

83.2

28.5

Major BPS

0.65

1.1

77.4

37.3

Major PPT

0.47

1.1

75.1

38.8

Minor 5ss

36.4

-1.5

3.3

45.9

43.7

Minor BPS

45.8

-0.2

68.31

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021888

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023131

56838141 - 56846117

7977