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Intron Name: Anas_platyrhynchos_platyrhynchos_5_56841689_56844496_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56841689 - 56844496

Intron Length:

2808

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCCTACCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

CTTTTCCTACCA

Flanking Amino Acid:

EMEQRVKKLKDLLKAFDNYK

Intron Amino Acid Position:

138

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

81.6

33.2

Major BPS

81.9

0.79

0.9

80.1

Major PPT

80.9

0.7

0.8

74.6

Minor 5ss

43.6

-0.7

2.9

58.5

40.3

Minor BPS

54.2

0.13

71.21

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021888

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023131

56838141 - 56846117

7977