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Intron Name: Anas_platyrhynchos_platyrhynchos_5_57062928_57065323_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57062928 - 57065323

Intron Length:

2396

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGATAC

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCCTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTTAC

U12 Branch Point Sequence:

TTACACTGAAAA

Flanking Amino Acid:

RIYMGMHSILDVIAGFLYAI

Intron Amino Acid Position:

143

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

73.9

30.8

Major BPS

71.4

0.53

1.2

63.4

Major PPT

81.6

0.71

0.7

75.9

26.3

Minor 5ss

38.4

-1.3

3.1

47.6

42.6

Minor BPS

50.9

0.02

1.7

65.95

Associated Gene:

Gene:

SGPP1

Ensembl Gene ID:

ENSAPLG00000013594

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014150

57052092 - 57065875

13784

ENSAPLT00000031925

57052092 - 57065875

13784