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Intron Name: Anas_platyrhynchos_platyrhynchos_5_57231579_57232149_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57231579 - 57232149

Intron Length:

571

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACACAT

5'SS Class:

major

3'SS Sequence:

TCTCCTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

AGGTGCTCACTT

Flanking Amino Acid:

YEHGVKLAKEIGAQCYLECS

Intron Amino Acid Position:

173

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

1.1

71.6

40.1

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

86.7

0.83

0.7

84.4

23.4

Minor 5ss

39.2

-1.2

3.2

56.5

47.6

Minor BPS

43.7

-0.4

2.1

59.02

44.6

Associated Gene:

Gene:

RHOJ

Ensembl Gene ID:

ENSAPLG00000014028

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014610

57231432 - 57282648

51217