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Intron Name: Anas_platyrhynchos_platyrhynchos_5_57341243_57344985_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57341243 - 57344985

Intron Length:

3743

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTACGTATA

5'SS Class:

major

3'SS Sequence:

TTCTCTGCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACGTCAC

U12 Branch Point Sequence:

TGCACCACACTC

Flanking Amino Acid:

CFEILLYKKNRTPVWFYMQI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.8

0.47

1.1

72.3

39.1

Major BPS

53.6

0.09

1.2

39.5

Major PPT

81.1

0.7

0.8

73.1

37.3

Minor 5ss

40.4

-1.1

56.2

42.2

Minor BPS

-0.7

1.9

49.09

Associated Gene:

Gene:

KCNH5

Ensembl Gene ID:

ENSAPLG00000014161

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014746

57341107 - 57384607

43501