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Intron Name: Anas_platyrhynchos_platyrhynchos_5_57379827_57384526_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

57379827 - 57384526

Intron Length:

4700

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTTGGCTGT

5'SS Class:

weak_major

3'SS Sequence:

TGGAAGAAGCTAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCACAA

U12 Branch Point Sequence:

TTTCACAAAAAA

Flanking Amino Acid:

EKIFSVAMMMKKYIFWFIDH

Intron Amino Acid Position:

400

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.6

0.23

1.3

54.5

Major BPS

68.5

0.46

75.3

29.8

Major PPT

45.6

-0.2

1.1

29.7

41.1

Minor 5ss

40.7

-1

3.2

53.5

45.6

Minor BPS

45.2

-0.3

2.1

64.62

40.8

Associated Gene:

Gene:

KCNH5

Ensembl Gene ID:

ENSAPLG00000014161

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014746

57341107 - 57384607

43501