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Intron Name: Anas_platyrhynchos_platyrhynchos_5_5778162_5790671_R

Intron Information:

Intron Rank:

130403

Intron Class:

major

Intron Phase:

Intron Coordinates:

5778162 - 5790671

Intron Length:

12510

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTAAGTCCA

5'SS Class:

major

3'SS Sequence:

CTGTTTACAACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAT

U12 Branch Point Sequence:

ATGCTCTGATCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

1.1

66.3

Major BPS

0.72

38.9

Major PPT

71.3

0.48

66.9

38.1

Minor 5ss

37.1

-1.5

2.9

48.7

41.1

Minor BPS

49.7

0.05

1.7

68.51

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017422

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020667

5704071 - 5841861

137791